Sequence Alignment and Modeling System
This is the distribution page for the
SAM software suite.
We also have a
WWW server for using SAM
The SAM distribution is subject to a license agreement.
If you are a college, university, or U.S. government lab, there is a
no-cost license to fill out and return to
UCSC. Otherwise, please request more information from
sam-info@cse.ucsc.edu.
Once we have received a licensing agreement, you will be given
instructions on how to access the appopriate object code directory.
Machine classes currently supported include:
The sae and hmmedit programs are available without license agreement
either in binary form or source
code. These are not updated, and not available in binary form for
all platforms.
The creation and distribution of SAM has been supported in
part by NSF grants
CDA-9115268, IRI-9123692, DBI-9408579 and
DBI-9808007; ONR grant N00014-91-J-1162; NIH
grants GM17129 and 1 R01 GM068570-01; DOE
grant DE-FG03-95ER62112; a grant
from the Danish Natural Science Research Council; and the UCSC Center for Biomolecular
Science and Engineering;
sam-info@cse.ucsc.edu
UCSC Computational Biology Group