Script for hmm700b

//build model with single loop state
BuildHMM 700 1 1 999
TieMult 0.0		// turn off complement ties

Tune 3 .001
RemoveUseless 20 .9	// remove useless

MergeStates 4 1.6	// merge aggressively
Tune 3 .001
RemoveUseless 20 2.99	// prune strongly

// add edges with potential gain>=4, states with gain>=5
AddUsefulIncr 4 5
Tune 5 .001
RemoveUseless 20 1.99	// prune mildly

// add edges with potential gain>=4, states with gain>=5
AddUsefulIncr 4 5
Tune 5 .001
RemoveUseless 20 .99	// remove useless

Flatten 1. .4		// flatten fairly strongly
AddSkipEdges 6.

ReorderStates
Print