June 2008 Archives by subject
Starting: Sun Jun 1 15:13:30 PDT 2008
Ending: Mon Jun 30 17:39:48 PDT 2008
Messages: 221
- [Genome] (no subject)
Pete Shepard
- [Genome] (no subject)
Pauline Fujita
- [Genome] (no subject)
Pete Shepard
- [Genome] (no subject)
Brooke Rhead
- [Genome] A question about EST mapping
linlinjiannan
- [Genome] A question about EST mapping
Kayla Smith
- [Genome] about liftover
wanghf at picb.ac.cn
- [Genome] Accessions aligned/quaryable
Micha Sammeth
- [Genome] Accessions aligned/quaryable
Ann Zweig
- [Genome] Affymetrix Transcriptome Phase III data availability
Arkady
- [Genome] Affymetrix Transcriptome Phase III data availability
Andy Pohl
- [Genome] Asking for helps for get microRNA promoters for all the Xenopus laevis from tropicalis genome at UCSC
Tiger Tang
- [Genome] availavility of self-chain data for some genomes
ZHAO Hao
- [Genome] availavility of self-chain data for some genomes
Ann Zweig
- [Genome] axt files for genome alignments of several species
Chang, Li-Wei
- [Genome] axt files for genome alignments of several species
Ann Zweig
- [Genome] axtChain program
JEEYOUNG LEE
- [Genome] axtChain program
Hiram Clawson
- [Genome] base quality scores
Anthony Rogers
- [Genome] base quality scores
Pauline Fujita
- [Genome] BosTau 4.0 self-chain
João Fadista
- [Genome] BosTau 4.0 self-chain
Ann Zweig
- [Genome] Bug-report: autoSql
Tomas Vinar
- [Genome] Bug-report: autoSql
Fan Hsu
- [Genome] Cow GO
E. Driscoll
- [Genome] Cow GO
Kayla Smith
- [Genome] Cow GO annotations
E. Driscoll
- [Genome] CR596180
Micha Sammeth
- [Genome] CR596180
Micha Sammeth
- [Genome] CR596180
Brooke Rhead
- [Genome] Create BED file for motif analysis
Ha Na Kim
- [Genome] Create BED file for motif analysis
Hiram Clawson
- [Genome] custom maf tracks
Brian Raney
- [Genome] custom refseq track questions?
Brooke Rhead
- [Genome] custom refseq track questions?
zxu
- [Genome] custom track with vista plot
Seongwon "Terry" Seo
- [Genome] custom track with vista plot
Hiram Clawson
- [Genome] dbSNP updates
Worthey, Elizabeth A.
- [Genome] dbSNP updates
Ann Zweig
- [Genome] dbSNP updates
Worthey, Elizabeth A.
- [Genome] dbSNP updates
Brooke Rhead
- [Genome] Dmel 5.1--4.3 conversion
Mia Levine
- [Genome] Dmel 5.1--4.3 conversion
Brooke Rhead
- [Genome] Dmel 5.1--4.3 conversion
Brooke Rhead
- [Genome] Drosophila pseudogenes
Patrick Nevarez
- [Genome] Drosophila pseudogenes
Ann Zweig
- [Genome] Encoding SNPs into sequence files
Travis Ptacek
- [Genome] Encoding SNPs into sequence files
Ann Zweig
- [Genome] error in loading custum track to genome browser
schung
- [Genome] error in loading custum track to genome browser
Brooke Rhead
- [Genome] exon/intron position for droSim1, and D. pseudoobscura (dp4) assembly, as soon as possible
na liu
- [Genome] filter by organism
Tom Nicholas
- [Genome] filter by organism
Brooke Rhead
- [Genome] finding target region with SIlico PCR
Sandra Pastorino
- [Genome] finding target region with SIlico PCR
Brooke Rhead
- [Genome] Fwd: suggestion
Tim Hefferon
- [Genome] Fwd: suggestion
Brooke Rhead
- [Genome] Gallus genome and other stuff
Shiri Yemini
- [Genome] Gallus genome and other stuff
Pauline Fujita
- [Genome] gff for HG17
Jairav Desai
- [Genome] gff for HG17
Pauline Fujita
- [Genome] GOA`
Yuan Jian
- [Genome] GOA`
Pauline Fujita
- [Genome] GOA`
Yuan Jian
- [Genome] GOA`
Yuan Jian
- [Genome] GOA`
Pauline Fujita
- [Genome] Hapmap LD phased shrank?
Russell, Archie
- [Genome] Hapmap LD phased shrank?
Brooke Rhead
- [Genome] hapmapSnps*
Dennis M.
- [Genome] hapmapSnps*
Galt Barber
- [Genome] hapmapSnps*
Angie Hinrichs
- [Genome] hapmapSnps*
Dennis M.
- [Genome] hapmapSnps*
Dennis M.
- [Genome] hapmapSnps*
Angie Hinrichs
- [Genome] hapmapSnps*
Brooke Rhead
- [Genome] hapmapSnps*
Robert Kuhn
- [Genome] hapmapSnps*
Dennis Maglinte
- [Genome] hapmapSnps*
Brooke Rhead
- [Genome] Help
Wxzheng
- [Genome] Help
Kayla Smith
- [Genome] help for retrieving 3' UTR sequences
Brooke Rhead
- [Genome] hg17 to hg18 liftOver and unmapped regions
Andy Pohl
- [Genome] hg17 to hg18 liftOver and unmapped regions
Arkady
- [Genome] hg17 to hg18 liftOver and unmapped regions
Andy Pohl
- [Genome] Hg18 snp
Ma, Jin
- [Genome] Hg18 snp
Ann Zweig
- [Genome] How to get all TF which target to sox-oct cis-element?
Jinyan Huang
- [Genome] How to get all TF which target to sox-oct cis-element?
Kayla Smith
- [Genome] how to liftOver gff file from human to chimpanzee
ying xu
- [Genome] how to liftOver gff file from human to chimpanzee
Hiram Clawson
- [Genome] how to obtain the transcription start site (TSS) of each gene
Ming Zheng
- [Genome] how to obtain the transcription start site (TSS) of each gene
Kayla Smith
- [Genome] How to use .maf files
mahdi moosa
- [Genome] How to use .maf files
Brooke Rhead
- [Genome] Human telomere location
Guruprasad Ananda
- [Genome] Human telomere location
Robert Kuhn
- [Genome] Human telomere location
Robert Kuhn
- [Genome] Human unigene alignment problem?
Joseph Dougherty
- [Genome] Human unigene alignment problem?
Brooke Rhead
- [Genome] Human unigene alignment problem?
Joseph Dougherty
- [Genome] Human unigene alignment problem?
Brooke Rhead
- [Genome] Human unigene alignment problem?
Joseph Dougherty
- [Genome] Installing Blat
Patrick Nevarez
- [Genome] Installing Blat
Hiram Clawson
- [Genome] Installing Blat
Galt Barber
- [Genome] Known Gene Table
Ahsan Huda
- [Genome] Known Gene Table
Kayla Smith
- [Genome] known genes
st kumer
- [Genome] known genes
Brooke Rhead
- [Genome] LiftOver file request
msoumill
- [Genome] LiftOver file request
Pauline Fujita
- [Genome] missing link for human/orangutan alignments on download page
Adnan Derti
- [Genome] missing link for human/orangutan alignments on download page
Brooke Rhead
- [Genome] mm8 knownIsoforms
Christian Roedelsperger
- [Genome] mm8 knownIsoforms
Ann Zweig
- [Genome] more_info_rs_batch
Pancoska, Petr
- [Genome] more_info_rs_batch
Kayla Smith
- [Genome] mouse human gene and protein alignments
Pai, Deepa
- [Genome] mouse human gene and protein alignments
Brooke Rhead
- [Genome] MS course
krishna agencies
- [Genome] MS course
Brooke Rhead
- [Genome] NAP5 Sequence
Janelle Bentz
- [Genome] NAP5 Sequence
Pauline Fujita
- [Genome] need data on Drosophila pseudoobscura (dp4)
liun at mskcc.org
- [Genome] need data on Drosophila pseudoobscura (dp4)
Brooke Rhead
- [Genome] need data on Drosophila pseudoobscura (dp4)
Brooke Rhead
- [Genome] new custom track problem
Paul Rigor (uci)
- [Genome] new custom track problem
Hiram Clawson
- [Genome] new custom track problem
Paul Rigor (uci)
- [Genome] new custom track problem
Brooke Rhead
- [Genome] new custom track problem
Paul Rigor (uci)
- [Genome] new custom track problem
Angie Hinrichs
- [Genome] new custom track problem
Paul Rigor (uci)
- [Genome] new custom track problem
Hiram Clawson
- [Genome] new custom track problem
Paul Rigor (uci)
- [Genome] new custom track problem
Ann Zweig
- [Genome] No longer able to download data from goldenPath
Viswanath, Lalitha (NIH/NCI) [C]
- [Genome] No longer able to download data from goldenPath
Kayla Smith
- [Genome] No longer able to download data from goldenPath
Viswanath, Lalitha (NIH/NCI) [C]
- [Genome] Non-mouse Refseq Genes table
Carsten Raabe
- [Genome] Non-mouse Refseq Genes table
Kayla Smith
- [Genome] Orthologous gene re-construction using xenomRNA
Pauline Fujita
- [Genome] Orthologous gene re-construction using xenomRNA
Lipovich, Leonard
- [Genome] Orthologous gene re-construction using xenomRNA
Mark Diekhans
- [Genome] Orthologous gene re-construction using xenomRNA
Blythe, Jason
- [Genome] P65 ChIP/chip data
John Bida
- [Genome] P65 ChIP/chip data
Brooke Rhead
- [Genome] P65 ChIP/chip data
John Bida
- [Genome] P65 ChIP/chip data
Brooke Rhead
- [Genome] Query regarding ENCODE data
Christopher Phillips
- [Genome] Query regarding ENCODE data
Ann Zweig
- [Genome] Query!
Tulika Srivastava
- [Genome] Query!
Pauline Fujita
- [Genome] question
Yalin Liao
- [Genome] question about liftover
wanghf
- [Genome] question about liftover
Hiram Clawson
- [Genome] question about mouse mm9 knowIsoforms.txt
Xinwei Han
- [Genome] question about mouse mm9 knowIsoforms.txt
Brooke Rhead
- [Genome] question on gene trap cell line displayed on genome browser
Hu, Yan
- [Genome] question on gene trap cell line displayed on genome browser
Kayla Smith
- [Genome] Question on hgTrackDb
Ma, Jin
- [Genome] Question on hgTrackDb
Galt Barber
- [Genome] question on human self-chains
ZHAO Hao
- [Genome] question on human self-chains
Kayla Smith
- [Genome] Question on transcript to genome
Ma, Jin
- [Genome] Question on transcript to genome
Kayla Smith
- [Genome] questions
Tara Crabb
- [Genome] questions
Brooke Rhead
- [Genome] questions
Ping Shen
- [Genome] questions
Brooke Rhead
- [Genome] refFlat.txt.gz file for hg17 and hg18
Yongsheng Bai
- [Genome] refFlat.txt.gz file for hg17 and hg18
Ann Zweig
- [Genome] refFlat.txt.gz file for hg17 and hg18
Yongsheng Bai
- [Genome] refFlat.txt.gz file for hg17 and hg18
Ann Zweig
- [Genome] refFlat_Hg16
Vipin Singh
- [Genome] refFlat_Hg16
Brooke Rhead
- [Genome] regarding batch query of a miRNA list
Brooke Rhead
- [Genome] regarding ORFs display in human mrna
Mittal, Vinay K
- [Genome] regarding ORFs display in human mrna
Brooke Rhead
- [Genome] Retrieving expression data at the gene level based on the Affy All Exon Arrays
Schraga Schwartz
- [Genome] Retrieving expression data at the gene level based on the Affy All Exon Arrays
Kayla Smith
- [Genome] rnaGene track for mouse
Michael Kertesz
- [Genome] rnaGene track for mouse
Ann Zweig
- [Genome] Same cdsStart and cdsEnd
Lucia Morales
- [Genome] Same cdsStart and cdsEnd
Kayla Smith
- [Genome] scaRNA family
Jaworski, Cynthia (NIH/NEI) [E]
- [Genome] scaRNA family
Ann Zweig
- [Genome] search for a human BAC/PAC clone for gene SLC6A3 with different haplotypes
Zhicheng Lin
- [Genome] search for a human BAC/PAC clone for gene SLC6A3 with different haplotypes
Brooke Rhead
- [Genome] sequence similarity
Cheung, Hannah
- [Genome] sequence similarity
Ann Zweig
- [Genome] some conflicts about the genome assembly and annotation database
mirrian at iis.sinica.edu.tw
- [Genome] some conflicts about the genome assembly and annotation database
Brooke Rhead
- [Genome] some conflicts about the genome assembly and annotation database
mirrian at iis.sinica.edu.tw
- [Genome] some conflicts about the genome assembly and annotation database
Brooke Rhead
- [Genome] suggestion
Tim Hefferon
- [Genome] table browser
Bogdan Tanasa
- [Genome] table browser
Kayla Smith
- [Genome] Table browser suggestion - offer a link to 'filter setting'
Ann Zweig
- [Genome] Table browser suggestion - offer a link to 'filter setting'
Gordon Robertson
- [Genome] TFBS enq
Whiteley, Gareth
- [Genome] TFBS enq
Pauline Fujita
- [Genome] track names and tracks overlaid
Claire Vandiedonck
- [Genome] track names and tracks overlaid
Robert Kuhn
- [Genome] track names and tracks overlaid
Brooke Rhead
- [Genome] Track view
Srinivas Iyyer
- [Genome] Track view
Hiram Clawson
- [Genome] two copies of TFF1 in mouse genome???
alexander dubeykovskiy
- [Genome] two copies of TFF1 in mouse genome???
Hiram Clawson
- [Genome] UCSC table viewer question
Whiteley, Gareth
- [Genome] UCSC table viewer question
Brooke Rhead
- [Genome] UniProtKB/Swiss-Prot id
Yuan Jian
- [Genome] UniProtKB/Swiss-Prot id
Kayla Smith
- [Genome] Updated: exon/intron position for droSim1, and D. pseudoobscura (dp4) assembly, as soon as possible
na liu
- [Genome] Updated: exon/intron position for droSim1, and D. pseudoobscura (dp4) assembly, as soon as possible
Kayla Smith
- [Genome] What's the parameters of genscan when used in scanning chimpanzee genome (panTro2) & rhesus genome (rhesus2)?
ying xu
- [Genome] What's the parameters of genscan when used in scanning chimpanzee genome (panTro2) & rhesus genome (rhesus2)?
Hiram Clawson
- [Genome] why are the CDS start and end zero
Yuan Jian
- [Genome] why are the CDS start and end zero
Hiram Clawson
- [Genome] wiggle overlapping
Amanda Miotto
- [Genome] wiggle overlapping
Kayla Smith
Last message date:
Mon Jun 30 17:39:48 PDT 2008
Archived on: Mon Jun 30 17:39:58 PDT 2008
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